BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020G09SP1|AL427672
(863 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1299 1475 0.0
3x_Contig8 311 1e-84
>3x_Contig1299
Length = 7525
Score = 1475 bits (725), Expect = 0.0
Identities = 814/863 (94%), Gaps = 2/863 (0%)
Strand = Plus / Plus
Query: 1 tagataatgatgaatgaagaacaaatgcataaatgaaagatgataggatgcgttttgwtt 60
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||
Sbjct: 4609 tagataatgatgaatgatgaacaaatgcataaatgactgatgataggatgcgttttg-tt 4667
Query: 61 tagtgaatttgaatcctctataaacttttgttttattgmttcatgtttgtaatkaactgt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 4668 tagtgaatttgaatcctctataaacttttgttttattgcttcatgtttgtaatgaactgt 4727
Query: 121 ataaaawaatttwagaattgwtttgcatchaaagtwccwaaggcattgatgaattcaaca 180
| |||| | ||| |||||| |||||||| ||||| || |||||||||||||||||||||
Sbjct: 4728 acaaaatacttttcgaattgttttgcatccaaagttcctaaggcattgatgaattcaaca 4787
Query: 181 actaatgattgtrggaactgaattarggggaagwagatttcggtcaaatatttgacgcat 240
|||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 4788 actaatgattgtgggaactgaatttgggggaagtagatttcggtcaaatatttgacgcat 4847
Query: 241 gcattttcgttgatattattatwggttgaagaattattgawgtwgtagagagcwttgagt 300
|||||||||||||||||||||| ||||||||||||||||| || ||||||||| ||||||
Sbjct: 4848 gcattttcgttgatattattattggttgaagaattattgatgttgtagagagctttgagt 4907
Query: 301 aatcwggagagathacatgcgawaactctgcagcmaccatcttggatattgaattcgtat 360
|||| |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 4908 aatctggagagatcacatgcgataactctgcagccaccatcttggatattgaattcgtat 4967
Query: 361 tcaggtttgaagggaatttcaaatagtagcgggawactggtggtaatgaaaaamtacgtt 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||
Sbjct: 4968 tcaggtttgaagggaatttcaaatagtagcgggatactggtggtaatgaaaaact-cgtt 5026
Query: 421 waacccatcgagtttgtttacgttgatagcgtttctatcctttgggtccgtgcagatgcc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5027 taacccatcgagtttgtttacgttgatagcgtttctatcctttgggtccgtgcagatgcc 5086
Query: 481 agtaccgaaaaagttgatgaaattgacaaggacgtaaatwgamagtatcawggwagamgt 540
||||||||||||||||||||||||||||||||||| ||| || ||| ||| || ||| ||
Sbjct: 5087 agtaccgaaaaagttgatgaaattgacaaggacgttaattgacagtttcatggtagacgt 5146
Query: 541 ctcgtgaatttcttctgcagtgtagcttaacaaatcggtgagcacccttggtaatawgta 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5147 ctcgtgaatttcttctgcagtgtagcttaacaaatcggtgagcacccttggtaatatgtt 5206
Query: 601 ttwatagcwctcwgtgagaagaagagaagaacagttatttgagacaaaagtagamaacaa 660
|| || || ||| ||||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct: 5207 tttattgctctctgtgagtagaagagaagtacagttatttgagacaaaagtagccaacaa 5266
Query: 661 tccatagtacgattttttcaaattgatcttttctctgaaggaatccgttacaatgacatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5267 tccatagtacgattttttcaaattgatcttttctctgaaggaatccgttacaatgacatt 5326
Query: 721 cttaccgttagaggatttggattctgaggatgtagatgattcttgttccaattgtgtttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5327 cttaccgttagaggatttggattctgaggatgtagatgattcttgttccaattgtgtttc 5386
Query: 781 caaagtgaaaactttctccacaacaggggtgaacaaattattgaaaagctgataacagtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5387 caaagtgaaaactttctccacaacaggggtgaacaaattattgaaaagctgataacagtt 5446
Query: 841 atcgtcatcyttaaacatgtgaa 863
||||||||| |||||||||||||
Sbjct: 5447 atcgtcatctttaaacatgtgaa 5469
>3x_Contig8
Length = 872
Score = 311 bits (153), Expect = 1e-84
Identities = 182/191 (95%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 669 acgattttttcaaattgatcttttctctgaaggaatccgttacaatgacattcttaccgt 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgattttttcaaattgatcttttctctgaaggaatccgttacaatgacattcttaccgt 60
Query: 729 tagaggatttggattctgaggatgtagatgattcttgttccaattgtgtttccaaagtga 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tagaggatttggattctgaggatgtagatgattcttgttccaattgtgtttccaaagtga 120
Query: 789 aaactttctccacaacaggg-gtgaacaaattattgaaaagctgataacagttatcgtca 847
|||||||||||||||||||| | ||||||||||| |||| || |||||| ||||| |||
Sbjct: 121 aaactttctccacaacagggcctcaacaaattattcaaaacctcataacacttatcctca 180
Query: 848 tcyttaaacat 858
|| ||||||||
Sbjct: 181 tctttaaacat 191
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6532
Number of Sequences: 1807
Number of extensions: 6532
Number of successful extensions: 159
Number of sequences better than 1.0e-20: 2
length of query: 863
length of database: 10,358,551
effective HSP length: 16
effective length of query: 847
effective length of database: 10,329,639
effective search space: 8749204233
effective search space used: 8749204233
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 49 (100.2 bits)